I realize this has been a long time coming....although I had explained before that doing the brown wire mod took care of my hesitation on acceleration problem, I still had an ongoing vibration problem, particularly at 40+ mph. Just this afternoon, after consulting with some mechanics (and getting some bad advice) I decided to get under my expedition and remove the front drive shaft. I had quite the time figuring out the right sockets and angles to do it (had to take the running board/step off first, then a cross-member from under the transfer case) but after 4 hours I finally got it out and.....guess what?
The u-joint at the transfer case was loose and messed up! The front u-joints still looked solid, but I had a sneaky suspicion that because I had the hesitation that it wasn't from the COP's (like it has been observed countless times before) that something was up with the drivetrain instead of the engine. Driving without the front driveshaft....NO MORE VIBRATION! No hesitation on acceleration and smooth driving! YAY!!!
I think my hesitation was based on the A4WD feeling some type of torque inbalance that was causing the system to reduce power to the front hub, based upon the broken u-joint not able to handle the added power in A4WD on heavy acceleration. It seems that the Auto 4WD system will automatically try to compensate by reducing power to the front hub when it feels that the driveshaft is not responding correctly (slippage), which causes the hesitation/bucking reminiscent of the COP problem.
If after replacing your plugs and COP's you still have hesitation/bucking on acceleration, CHECK YOUR FRONT U-JOINTS! I hope this info helps someone down the road!
I will post a follow-up when I get the driveshaft u-joints fixed and have a qualified mechanic install it again. If the vibration returns then it might be something else. I'll also rewire A4WD to pre-brown wire mod status to see if I still get the bucking from before. May be awhile before I can afford it but STAY TUNED!!!
THANKS EVERYONE FOR YOUR GREAT ADVICE!